1. Extract mutagenic method from progeny info (PT field) so that we can know all the categories.
2. Add first 50 characters of each phenotype description to list_of_pages and change the name to index_of_phenotypes.
3. Make start page like Bing, with large image filling the screen and a search box.
   1. About this site, etc could be little links near the bottom.

1. Invite local testers
2. Construct complete table of existing MaizeGDB Variation IDs and/or phenotype IDs for each mutant.
3. Construct complementary list of mutants that have no such corresponding IDs.
4. Automate update process
   1. Automate posting pages
   2. Automate backup of ACCESS database (use AT?)
   3. Automate daily and/or weekly updates?
5. Set up a system for adding new content
   1. Come up with “standard” form for submitting images and descriptions
      1. Required information
         1. Researcher contact information
         2. For each image
            1. File name
            2. Gene name
            3. Phenotype name
            4. Phenotype description
            5. Caption
      2. If available please provide the following
         1. Genetic information
            1. Originating individual ID (i.e. your internal unique ID)
            2. Designated gene symbol
            3. Physical location
               1. Genomic
               2. Chromosomal
            4. Allelic information
            5. Experimental information confirming the mutation
         2. MaizeGDB Variation ID

1. Images completely missing
   1. iojap
   2. reduced_endosperm
   3. reduced_floury_endosperm
2. Images uploaded (need smaller uploaded photos so that page times are reasonable on slow connections)
   1. B chromosome
   2. Chromosome Deficiency
   3. intensifier
   4. red_aleurone
   5. red_color
   6. shrunken
   7. sugary
   8. telocentric_chromosome
   9. trisomic_chromosome_3
   10. virescent_mutable
   11. waxy
   12. white_endosperm
3. One or more old images currently being used for (list is far from complete)
   1. anthocyanin accumulation
   2. barren_inflorescence
   3. brown kernel
   4. brown midrib
   5. chocolate pericarp
   6. clear patches
   7. collapsed color mosaic
   8. collapsed defective kernel
   9. collapsed mosaic kernel palegreen striped seedling
   10. crinkled leaf small plant
   11. virescent
4. Images needing to be rotated
   1. crumpled floury proline responsive
   2. golden sheath
   3. greenstripe
   4. iojap
   5. japonica striping
   6. lemon white
   7. liguleless
   8. nonchromosomal stripe
   9. polymitotic
   10. purple pigment
   11. ragged_leaf_bladeless
   12. ramosa
   13. salmon silks
   14. silky ear male sterile tassel
   15. striate
   16. tassel seed
   17. tasselless
   18. teopod
   19. tunicate
   20. virescent
   21. white deficiency
5. Fix rotation of images (overlaps with above):
   1. http://images.maizegdb.org/db_images/Variation/mgn/92_157_1_1_ts_2651_dsc00365.jpg
   2. http://images.maizegdb.org/db_images/Variation/mgn/92_156_2_4hom_ts_2651_dsc00405.jpg
   3. http://images.maizegdb.org/db_images/Variation/mgn/7101_3161_0706_45.jpg
   4. http://images.maizegdb.org/db_images/Variation/mgn/7101_3161_0708_45.jpg
   5. http://images.maizegdb.org/db_images/Variation/mgn/7101_3161_0706_54.jpg
   6. http://images.maizegdb.org/db_images/Variation/mgn/7101_3161_0706_53.jpg
   7. http://images.maizegdb.org/db_images/Variation/mgn/7101_3161_2580_37.jpg
   8. http://images.maizegdb.org/db_images/Variation/mgn/7101_3161_2557_74.jpg
   9. http://images.maizegdb.org/db_images/Variation/mgn/7101_3161_2580_16.jpg
6. Images found in another directories
   1. iojap
7. Modify captions to emphasize that the normal images are normal
   1. roothair defective

1. Get original photo from CD:
   1. http://images.maizegdb.org/db_images/Variation/mgn/5133_2022_0662_62.jpg
2. Fix automatic matching of MaizeGDB variation IDs
   1. viviparous
   2. pigmy
3. Finish adding links to MaizeGDB variation pages
4. Automate process of updating pages
5. Add tags based on defined phenotypes
6. Create pages that display all of the content for individual tags
7. Exclude tag-based pages from search index so that there will not be duplicate hits to the same content
8. Replace images that have been edited since Oct 2012.
9. Crop images (if still needed after updating images)
   1. http://images.maizegdb.org/db_images/Variation/mgn/downsized/7099_3173_2577_38.jpg
10. Add wikitionary links to terms that are likely for people to not be familiar with (e.g. andromonecious)
11. Hide developer sidebar (unless logged on). The biggest problem is the “show source” icon looks like a search icon.

Miscellaneous

1. Find out about monitoring page hits

1. Explanatory text
   1. Overview
   2. Historical
   3. Topics
      1. Modifiers
         1. Environment
         2. Genetic interactions
   4. Summary